[2511.13984] Node-Level Uncertainty Estimation in LLM-Generated SQL

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Abstract:We present a practical framework for detecting errors in LLM-generated SQL by estimating uncertainty at the level of individual nodes in the query’s abstract syntax tree (AST). Our approach proceeds in two stages. First, we introduce a semantically aware labeling algorithm that, given a generated SQL and a gold reference, assigns node-level correctness without over-penalizing structural containers or alias variation. Second, we represent each node with a rich set of schema-aware and lexical features – capturing identifier validity, alias resolution, type compatibility, ambiguity in scope, and typo signals – and train a supervised classifier to predict per-node error probabilities. We interpret these probabilities as calibrated uncertainty, enabling fine-grained diagnostics that pinpoint exactly where a query is likely to be wrong. Across multiple databases and datasets, our method substantially outperforms token log-probabilities: average AUC improves by +27.44% while maintaining robustness under cross-database evaluation. Beyond serving as an accuracy signal, node-level uncertainty supports targeted repair, human-in-the-loop review, and downstream selective execution. Together, these results establish node-centric, semantically grounded uncertainty estimation as a strong and interpretable alternative to aggregate sequence level confidence measures.